• DocumentCode
    2045041
  • Title

    Integrating Biological Information for Feature Selection in Microarray Data Classification

  • Author

    Fang, Ong Huey ; Mustapha, Norwati ; Sulaiman, Md Nasir

  • Author_Institution
    Dept. of Comput. Sci., Univ. Putra Malaysia, Serdang, Malaysia
  • Volume
    2
  • fYear
    2010
  • fDate
    19-21 March 2010
  • Firstpage
    330
  • Lastpage
    334
  • Abstract
    Due to the high dimensionality of microarray data, feature selection is an indispensable task in classification to identify a smaller subset of relevant genes. However, feature selection techniques that consider solely on gene expression values might not be able to identify biologically meaningful genes. Thus, this paper presents an integrative feature selection method that is able to incorporate gene expression data with additional biological data for finding informative genes. The proposed approach is a two-stage method that combined the strength of both filter method and association analysis. The experimental results show that the selected gene subsets are able to improve classification accuracy.
  • Keywords
    bioinformatics; lab-on-a-chip; pattern classification; association analysis; biological information; biologically meaningful genes; feature selection; filter method; gene expression values; microarray data classification; Biology computing; Cancer; Computer applications; Computer science; DNA; Data mining; Filters; Gene expression; Ontologies; Throughput; Classification; Data Mining; Feature Selection; Microarray;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer Engineering and Applications (ICCEA), 2010 Second International Conference on
  • Conference_Location
    Bali Island
  • Print_ISBN
    978-1-4244-6079-3
  • Electronic_ISBN
    978-1-4244-6080-9
  • Type

    conf

  • DOI
    10.1109/ICCEA.2010.215
  • Filename
    5445665