• DocumentCode
    2049904
  • Title

    Classifiers based on rough mereology in analysis of DNA microarray data

  • Author

    Artiemjew, Piotr

  • Author_Institution
    Dept. of Math. & Comput. Sci., Univ. of Warmia & Mazury, Olsztyn, Poland
  • fYear
    2010
  • fDate
    7-10 Dec. 2010
  • Firstpage
    273
  • Lastpage
    278
  • Abstract
    There are numerous application of DNA microar-rays. The most frequently used application is the one used to research gene expression. The aim is, among others, to detect symptoms of illnesses in tissues, to predict the predisposition for some illnesses and for personal identification. The huge amount of information obtained from DNA microarrays in range of tens of thousands of genes causes many difficulties. Many algorithms, for instance, many rough set methods cannot be applied for this reason and due to low number of training objects tend to overfit. In this paper, we aim at presenting gene separation and classification methods by means of the granular classifier based on weighted voting, which was investigated recently by Polkowski and Artiemjew. Results of the research show that the obtained results are in many cases better than some standard methods such as rough set standard exhaustive classifier and k-nearest neighbor.
  • Keywords
    DNA; data analysis; diseases; genetics; granular computing; health care; pattern classification; rough set theory; DNA microarray data analysis; gene classification method; gene expression; gene separation method; granular classifier; illnesses; k-nearest neighbor; personal identification; predisposition; rough mereology; rough set method; Accuracy; DNA; Feature extraction; Gene expression; Pattern recognition; Rough sets; Training; DNA microarrays; granular computing; rough mereology; rough sets;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Soft Computing and Pattern Recognition (SoCPaR), 2010 International Conference of
  • Conference_Location
    Paris
  • Print_ISBN
    978-1-4244-7897-2
  • Type

    conf

  • DOI
    10.1109/SOCPAR.2010.5686493
  • Filename
    5686493