Title :
Using digital electronic design flow to create a Genetic Design Automation tool
Author :
Gendrault, Yves ; Madec, Morgan ; Wlotzko, Vincent ; Andraud, Martin ; Lallement, Christophe ; Haiech, Jacques
Author_Institution :
Inst. d´Electron. du Solide et des Syst., Univ. de Strasbourg (Unistra), Strasbourg, France
fDate :
Aug. 28 2012-Sept. 1 2012
Abstract :
Synthetic bio-systems become increasingly more complex and their development is lengthy and expensive. In the same way, in microelectronics, the design process of very complex circuits has benefited from many years of experience. It is now partly automated through Electronic Design Automation tools. Both areas present analogies that can be used to create a Genetic Design Automation tool inspired from EDA tools used in digital electronics. This tool would allow moving away from a totally manual design of bio-systems to assisted conception. This ambitious project is presented in this paper, with a deep focus on the tool that automatically generates models of bio-systems directly usable in electronic simulators.
Keywords :
digital circuits; electronic design automation; integrated circuits; EDA tools; bio-systems models; digital electronic design flow; electronic design automation tools; electronic simulators; genetic design automation tool; microelectronics; synthetic bio-systems; Biological information theory; Biological system modeling; Design automation; Integrated circuit modeling; Mathematical model; Software; Synthetic biology; Automation; Electronics; Genetics; HeLa Cells; Humans; Synthetic Biology;
Conference_Titel :
Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE
Conference_Location :
San Diego, CA
Print_ISBN :
978-1-4244-4119-8
Electronic_ISBN :
1557-170X
DOI :
10.1109/EMBC.2012.6347247