Title :
Mycobacterium tuberculosis recognition with conventional microscopy
Author :
CostaFilho, C.F.F. ; Levy, P.C. ; Xavier, C.M. ; Costa, M.G.F. ; Fujimoto, L.B.M. ; Salem, J.
Author_Institution :
Centro de Pesquisa e Desenvolvimento em Tecnol. Eletron. e da Informacao, Univ. Fed. do Amazonas, Manaus, Brazil
fDate :
Aug. 28 2012-Sept. 1 2012
Abstract :
This paper presents a new method for segmentation of tuberculosis bacillus in conventional sputum smear microscopy. The method comprises three main steps. In the first step, a scalar selection are made for characteristics from the following color spaces: RGB, HSI, YCbCr and Lab. The features used for pixel classification in the segmentation step were the components and subtraction of components of these color spaces. In the second step, a feedforward neural network pixel classifier, using selected characteristics as inputs, is applied to segment pixels that belong to bacilli from the background. In third step geometric characteristics, especially the eccentricity, and a new proposed color characteristic, the color ratio, are used to noise filtering. The best sensitivity achieved in bacilli detection was 91.5%.
Keywords :
biological techniques; biology computing; feature extraction; feedforward neural nets; filtering theory; image classification; image colour analysis; image denoising; image segmentation; microorganisms; optical images; optical microscopy; sensitivity; HSI color spaces; Lab color spaces; RGB color spaces; YCbCr color spaces; bacilli detection; conventional microscopy; conventional sputum smear microscopy; feedforward neural network pixel classifier; mycobacterium tuberculosis recognition; noise filtering; pixel classification; scalar selection; sensitivity; tuberculosis bacillus segmentation; Fluorescence; Image color analysis; Image segmentation; Microscopy; Neural networks; Noise; Sensitivity; Humans; Microscopy; Mycobacterium tuberculosis; Reproducibility of Results; Sensitivity and Specificity; Sputum;
Conference_Titel :
Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE
Conference_Location :
San Diego, CA
Print_ISBN :
978-1-4244-4119-8
Electronic_ISBN :
1557-170X
DOI :
10.1109/EMBC.2012.6347426