• DocumentCode
    2117253
  • Title

    Recognition of Plant mRNA Polyadenylation Sites Based on High-Dimensional Space Points´ Covering Method

  • Author

    Ji, Guoli ; Zheng, Jianti ; Zou, Dan ; Dong, Min ; Qingshun Quinn Li

  • Author_Institution
    Dept. of Autom., Xiamen Univ., Xiamen
  • Volume
    2
  • fYear
    2008
  • fDate
    20-22 Dec. 2008
  • Firstpage
    616
  • Lastpage
    620
  • Abstract
    To accurately predict messenger RNA polyadenylation sites of the model plant Arabidopsis, we developed a new program using the method of High-Dimensional Space Points´ Covering, based on Biomimetic Pattern Recognition Theory. Upon analysis of experimental data and comparing with the results produced by Support Vector Machine, it is demonstrated that our program is reliable and effective judged by its specificity and sensitivity of the prediction. The program performed especially well with a reduced training sample size.
  • Keywords
    biomimetics; botany; macromolecules; organic compounds; pattern recognition; support vector machines; biomimetic pattern recognition; hyper sausage neuron; plant mRNA polyadenylation sites; space points covering method; support vector machine; biomimetic pattern recognition; high-dimensional space points´ covering; hyper sausage neuron; poly (A) site;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information Science and Engineering, 2008. ISISE '08. International Symposium on
  • Conference_Location
    Shanghai
  • Print_ISBN
    978-1-4244-2727-4
  • Type

    conf

  • DOI
    10.1109/ISISE.2008.75
  • Filename
    4732469