DocumentCode
2117253
Title
Recognition of Plant mRNA Polyadenylation Sites Based on High-Dimensional Space Points´ Covering Method
Author
Ji, Guoli ; Zheng, Jianti ; Zou, Dan ; Dong, Min ; Qingshun Quinn Li
Author_Institution
Dept. of Autom., Xiamen Univ., Xiamen
Volume
2
fYear
2008
fDate
20-22 Dec. 2008
Firstpage
616
Lastpage
620
Abstract
To accurately predict messenger RNA polyadenylation sites of the model plant Arabidopsis, we developed a new program using the method of High-Dimensional Space Points´ Covering, based on Biomimetic Pattern Recognition Theory. Upon analysis of experimental data and comparing with the results produced by Support Vector Machine, it is demonstrated that our program is reliable and effective judged by its specificity and sensitivity of the prediction. The program performed especially well with a reduced training sample size.
Keywords
biomimetics; botany; macromolecules; organic compounds; pattern recognition; support vector machines; biomimetic pattern recognition; hyper sausage neuron; plant mRNA polyadenylation sites; space points covering method; support vector machine; biomimetic pattern recognition; high-dimensional space points´ covering; hyper sausage neuron; poly (A) site;
fLanguage
English
Publisher
ieee
Conference_Titel
Information Science and Engineering, 2008. ISISE '08. International Symposium on
Conference_Location
Shanghai
Print_ISBN
978-1-4244-2727-4
Type
conf
DOI
10.1109/ISISE.2008.75
Filename
4732469
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