Title :
Semantic Map of Services for Structural Bioinformatics
Author :
Tufféry, Pierre ; Lacroix, Zoé ; Ménager, Hervé
Author_Institution :
Equipe de Bioinformatique Genomique et Moleculaire, Univ. Denis Diderot, Paris
Abstract :
We present a semantic map of resources for structural bioinformatics applied to proteins, i.e., various methods to predict and analyze protein structures in silico. Our map depicts resources on two levels: a logical level that provides a high-level description of the scientific concepts using a domain ontology; a physical level, that describes the actual resources implementing these connections. Scientists can use our system to express a query that captures their scientific aim, and are guided to identify the resources best meeting their needs. It is intended to provide scientists a tool to register and share knowledge about the available services in this field. Our approach addresses the problem of semantic interoperability of scientific resources publicly available on the Web
Keywords :
biology computing; molecular biophysics; ontologies (artificial intelligence); open systems; proteins; query processing; scientific information systems; semantic Web; domain ontology; protein structures; scientific resources; semantic Web; semantic interoperability; semantic map; silico; structural bioinformatics; Access protocols; Algorithm design and analysis; Bioinformatics; Databases; Graphics; Internet; Ontologies; Performance analysis; Proteins; Resource management;
Conference_Titel :
Scientific and Statistical Database Management, 2006. 18th International Conference on
Conference_Location :
Vienna
Print_ISBN :
0-7695-2590-3
DOI :
10.1109/SSDBM.2006.47