DocumentCode
2134539
Title
A pipeline structure for analysis of DNA microarrays
Author
Samavi, Shadrokh ; Shirani, Shahram ; Karimi, Nader
Author_Institution
Dept. of Electr. & Comput. Eng., McMaster Univ., Hamilton, Ont., Canada
Volume
2
fYear
2003
fDate
28-30 Aug. 2003
Firstpage
1012
Abstract
In this paper we present a new pipeline architecture for DNA microarray image processing. Taking advantage of the inherent delay in formation of DNA images, the processing tasks that are to be performed on the image (e.g., noise and small spot removal) are built into a six-stage pipeline. The suggested architecture has been designed and tested for a variety of microarray sizes. The structure has proved to be highly versatile, modular and expandable.
Keywords
DNA; biology computing; image processing; molecular biophysics; pipeline processing; DNA microarray image processing; modular structure; six-stage pipeline; Bioinformatics; DNA; Genetics; Genomics; Glass; Image processing; Microscopy; Pipelines; Proteins; Sequences;
fLanguage
English
Publisher
ieee
Conference_Titel
Communications, Computers and signal Processing, 2003. PACRIM. 2003 IEEE Pacific Rim Conference on
Print_ISBN
0-7803-7978-0
Type
conf
DOI
10.1109/PACRIM.2003.1235956
Filename
1235956
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