Title :
Molecular cloning and bioinformatics analysis of genomic DNA of LeWRKY1
Author :
Qingpeng, Sun ; Yongkun, Yu
Author_Institution :
College of biotechnology, Beijing University of Agriculture, China 102206
Abstract :
WRKY transcription factor proteins belong to the WRKY super family of zinc finger transcription factors that have been subject to a large plant-specific diversification. Using RT-PCR approaches, a genomic DNA from tomato was cloned. Sequence analysis showed that it contained 3 introns and 4 extrons, and it encoded a protein, named as LeWRKY1, which consisted of 399 amino acids. LeWRKY1 belongs to the group II WRKY transcription factor. LeWRKY1. Phylogenetic analysis showed that it had the same origin with Capsicum annuum´s WRKY (ADD62692).
Keywords :
Bioinformatics; DNA; Genomics; Phylogeny; Proteins; Stress; LeWRKY1; bioinformatics analysis; tomato;
Conference_Titel :
Information Science and Engineering (ICISE), 2010 2nd International Conference on
Conference_Location :
Hangzhou, China
Print_ISBN :
978-1-4244-7616-9
DOI :
10.1109/ICISE.2010.5690845