DocumentCode
2177705
Title
Finding Bioelectronics Correlations in Retro-transcribing Viral Proteomic Sequences Using an Evolutionary Clustering Technique
Author
Garza-Dominguez, Ramiro ; Bautista-Thompson, Ernesto
Author_Institution
Centro de Tecnol. de Inf., Univ. Autonoma del Carmen, Ciudad del Carmen, Mexico
fYear
2009
fDate
21-25 Sept. 2009
Firstpage
180
Lastpage
184
Abstract
A cluster analysis on a set of Retro-Transcribing viral proteomic sequences is described in this paper. A Lysine-Arginine concentration vector is calculated from the sequences and analyzed to identify correlations among species. The computational strategy is based on the K-Means algorithm to partition the data into disjoint sets of points. A search method based on Evolutionary Programming is incorporated, in order to optimize the cluster structures. Experimental results show a number of interesting and unexpected similarities. These similarities could suggest bioelectronics relationships, in the context of the electronic mobility theory.
Keywords
biomedical electronics; evolutionary computation; pattern clustering; proteomics; K-Means algorithm; Lysine-Arginine concentration vector; Retro-Transcribing viral proteomic sequences; bioelectronics; clustering technique; electronic mobility theory; evolutionary programming; Amino acids; Clustering algorithms; Evolution (biology); Genetic programming; Humans; Partitioning algorithms; Proteins; Proteomics; Sequences; Viruses (medical); Bioelectronics; Clustering; Evolutionary Programming; Lysine; Retro-Transcribing Viruses;
fLanguage
English
Publisher
ieee
Conference_Titel
Computer Science (ENC), 2009 Mexican International Conference on
Conference_Location
Mexico City
Print_ISBN
978-1-4244-5258-3
Type
conf
DOI
10.1109/ENC.2009.44
Filename
5452564
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