• DocumentCode
    2181001
  • Title

    Bio-array images processing and genetic networks modelling

  • Author

    Demongeot, J. ; Berger, F. ; Baum, T.P. ; Thuderoz, F. ; Cohen, O.

  • Author_Institution
    Fac. of Medicine, TIMC-IMAG CNRS, La Tronche, France
  • fYear
    2002
  • fDate
    2002
  • Firstpage
    50
  • Lastpage
    53
  • Abstract
    The new tools available for gene expression studies are essentially the bio-array methods using a large variety of physical detectors (isotopes, fluorescent markers, ultrasound, ...). Here we present an image processing method independent of the detector type, dealing with the noise and with the peaks overlapping, the peaks revealing the detector activity (isotopic in the presented example), correlated with the gene expression. After this first step of image processing, we can extract information about causal influence (activation or inhibition) a gene can exert on other genes, leading to clusters of co-expression in which we extract an interaction matrix explaining the dynamics of coexpression correlated to the studied tissue function.
  • Keywords
    arrays; genetics; image segmentation; medical image processing; physiological models; activation; bioarray images processing; causal influence information extraction; coexpression clusters; coexpression dynamics; genetic networks modelling; inhibition; mRNAs; studied tissue function; Biomedical imaging; Data mining; Detectors; Gene expression; Genetics; Image processing; Isotopes; Limit-cycles; Noise figure; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging, 2002. Proceedings. 2002 IEEE International Symposium on
  • Print_ISBN
    0-7803-7584-X
  • Type

    conf

  • DOI
    10.1109/ISBI.2002.1029190
  • Filename
    1029190