• DocumentCode
    2186439
  • Title

    A New Prediction Protein Structure Method Based on Genetic Algorithm and Coarse-Grained Protein Model

  • Author

    Wang, Cai-Yun ; Zhu, Hao-Dong ; Cai, Le-cai

  • Author_Institution
    Dept. of Electron & Technol., Sichuan Univ. of Sci. & Eng., Zigong, China
  • fYear
    2009
  • fDate
    17-19 Oct. 2009
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    De novo prediction of protein structures, structures prediction from amino acid sequences which are not similar to those of hitherto resolved structures, has been one of the major challenges in bioinformatics. A new prediction protein structure method based on Genetic Algorithm and Coarse-grained protein model is presented. Genetic Algorithm is a high performance optimization method and can effectively assemble a separate sequence, and Coarse-grained protein model have consistently assembled fragments are dynamically searched by Langevin molecular dynamics of conformational change. This new method combines the advantages of Genetic Algorithm and Coarse-grained protein model, which will improve the accuracy of protein structure prediction.
  • Keywords
    bioinformatics; genetic algorithms; molecular biophysics; molecular configurations; molecular dynamics method; proteins; Langevin molecular dynamics; amino acid sequences; bioinformatics; coarse-grained protein model; conformational change; de novo prediction; genetic algorithm; protein structure prediction method; Assembly; Bioinformatics; Computer aided instruction; Educational technology; Evolution (biology); Genetic algorithms; Genetic mutations; Optimization; Predictive models; Protein engineering;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Engineering and Informatics, 2009. BMEI '09. 2nd International Conference on
  • Conference_Location
    Tianjin
  • Print_ISBN
    978-1-4244-4132-7
  • Electronic_ISBN
    978-1-4244-4134-1
  • Type

    conf

  • DOI
    10.1109/BMEI.2009.5305230
  • Filename
    5305230