Title :
Services Oriented Architecture for Managing Workflows of Avian Flu Grid
Author :
Clementi, Luca ; Krishnan, Sriram ; Goodman, Wesley ; REN, Jingyuan ; Li, Wilfred W. ; Arzberger, Peter W. ; Vareille, Guillaume ; Dallakyan, Sargis ; Sanner, Michel F.
Author_Institution :
Nat. Biomed. Comput. Resource, Univ. of California, San Diego, CA, USA
Abstract :
The avian flu grid is a virtual organization dedicated to the discovery of novel inhibitors for the pandemic avian flu threat, leveraging grid technologies and computational resources provided by PRAGMA and its partners. In this context it is essential to adopt tools which increase the productivity of the computational scientists without advanced training on grid technologies. To reduce the learning curve, we have augmented tools that most domain scientists are already familiar with, and hidden the complexity of the underlaying infrastructure, through automatic user interface generation and workflow support, beyond the standard command line based approach. Here we describe the current state of the infrastructure deployed and how it has facilitated the training of new researchers in the drug discovery area. We provide details on Vision, a visual programming environment used to define scientific workflows, and Opal, an automatic Web service wrappers for scientific applications on Grid resources, and how they are integrated with other established back-end technologies.
Keywords :
Web services; biology computing; diseases; grid computing; programming environments; software architecture; user interfaces; visual programming; workflow management software; Opal; PRAGMA; Vision; augmented tools; automatic Web service wrappers; avian flu grid; computational resources; computational scientists; drug discovery area; grid resources; grid technology; learning curve; pandemic avian flu threat; productivity; scientific workflows; services oriented architecture; user interface generation; virtual organization; visual programming environment; workflow support; Drugs; Grid computing; Influenza; Inhibitors; Pharmaceutical technology; Productivity; Programming environments; Service oriented architecture; User interfaces; Web services; Drug Design; Grid; SOA; Workflow; eScience;
Conference_Titel :
eScience, 2008. eScience '08. IEEE Fourth International Conference on
Conference_Location :
Indianapolis, IN
Print_ISBN :
978-1-4244-3380-3
Electronic_ISBN :
978-0-7695-3535-7
DOI :
10.1109/eScience.2008.37