Title :
Wavelet Analysis of the Genome of the Model Plant Arabidopsis thaliana
Author :
Kwan, Benjamin Y. M. ; Kwan, J.Y.Y. ; Kwan, Hon Keung
Author_Institution :
Dept. of Electr. & Comput. Eng., Windsor Univ., Ont.
Abstract :
This paper attempts to identify high gene density locations within the five chromosomes of the model plant, Arabidopsis thaliana, through the use of multiresolution wavelet denoising technique. Results indicate that wavelet denoised G+C content help revealing the boundaries of isochores in chromosome level, and the boundaries between coding and non-coding regions in gene level at adjustable resolution
Keywords :
biology computing; botany; cellular biophysics; genetic engineering; Arabidopsis thaliana plant; G+C content; chromosomes; genome; multiresolution wavelet denoising technique; Bioinformatics; Biological cells; Frequency; Genetics; Genomics; Humans; Multiresolution analysis; Noise reduction; Organisms; Wavelet analysis;
Conference_Titel :
TENCON 2006. 2006 IEEE Region 10 Conference
Conference_Location :
Hong Kong
Print_ISBN :
1-4244-0548-3
Electronic_ISBN :
1-4244-0549-1
DOI :
10.1109/TENCON.2006.344207
