• DocumentCode
    2237538
  • Title

    Challenge session speakers: Engaging today´s genomics resources

  • Author

    Ting Wang ; Ferrin, Thomas

  • Author_Institution
    Genetics Dept., Washington Univ. in St. Louis, St. Louis, MO, USA
  • fYear
    2013
  • fDate
    13-14 Oct. 2013
  • Firstpage
    1
  • Lastpage
    2
  • Abstract
    Advances in next-generation sequencing platforms have reshaped the landscape of genomic and epigenomic research. Large consortiums such as the ENCyclopedia of DNA Elements (ENCODE), the Roadmap Epigenomics project and The Cancer Genome Atlas (TCGA) have generated tens of thousands of sequencing-based genome-wide data-sets, creating a reference and resource for the scientific community. Small groups of researchers are now able to rapidly obtain huge volumes of genomic data and are in great need of putting their own data in the context of the consortium data for comparison. These data are often accompanied by rich metadata describing the sample and experiment, critical for their interpretation. Fast evolving technologies, such as those interrogating long-range chromatin interactions, are generating new types of data in similarly large volumes. Visualizing, navigating, and interpreting such data in a meaningful way is a daunting challenge. In this presentation I will discuss the present challenges in genomic data visualization and the rapid evolution of Genome Browsers.
  • Keywords
    biology computing; cancer; data visualisation; genomics; meta data; online front-ends; ENCODE; ENCyclopedia of DNA Elements; Genome Browsers; Roadmap Epigenomics project; TCGA; The Cancer Genome Atlas; consortium data; epigenomic research; genomic data visualization; interrogating long-range chromatin interactions; metadata; next-generation sequencing; sequencing-based genome-wide datasets;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biological Data Visualization (BioVis), 2013 IEEE Symposium on
  • Conference_Location
    Atlanta, GA
  • Type

    conf

  • DOI
    10.1109/BioVis.2013.6664339
  • Filename
    6664339