DocumentCode :
2285375
Title :
cDNA microarray image analysis
Author :
Tozduman, Ersin ; Albayrak, Songül
Author_Institution :
Bilgisayar Muhendisligi Bolumu, Yildiz Teknik Univ., Istanbul, Turkey
fYear :
2009
fDate :
20-22 May 2009
Firstpage :
1
Lastpage :
4
Abstract :
cDNA microarray image analysis has grown very important these days because of the growing field which it´s part of: microarray expression analysis. In this work we propose a new cDNA microarray image analysis system. A cDNA microarray analysis system consists of three main parts which are gridding, segmentation and information extraction, respectively. In gridding stage we propose a new automated gridding technique which is based on mathematical morphology. For segmentation we propose two different algorithm which are based on K-Means clustering and Fuzzy C-Means clustering respectively. On the final stage, information extraction, our proposed system uses a classical approach which calculates background values locally. The proposed system has open parts in the way of developement and is still being worked on.
Keywords :
DNA; arrays; feature extraction; fuzzy control; grid computing; image segmentation; medical image processing; molecular biophysics; K-means clustering; automated gridding technique; cDNA microarray; fuzzy C-means clustering; image analysis; image information extraction; image segmentation; microarray expression analysis; Bioinformatics; Clustering algorithms; DNA; Data mining; Genomics; Image analysis; Image segmentation; Information analysis; Instruments; Morphology;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Engineering Meeting, 2009. BIYOMUT 2009. 14th National
Conference_Location :
Balcova, Izmir
Print_ISBN :
978-1-4244-3605-7
Electronic_ISBN :
978-1-4244-3606-4
Type :
conf
DOI :
10.1109/BIYOMUT.2009.5130308
Filename :
5130308
Link To Document :
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