• DocumentCode
    2319540
  • Title

    Hybrid feature selection method for biomedical datasets

  • Author

    Solorio-Fernández, Saúl ; Trinidad, José Fco Martínez- ; Carrasco-Ochoa, Jesús Ariel ; Zhang, Yan-Qing

  • Author_Institution
    Comput. Sci. Dept., Nat. Inst. for Astrophys., Opt. & Electron., Tonantzintla, Mexico
  • fYear
    2012
  • fDate
    9-12 May 2012
  • Firstpage
    150
  • Lastpage
    155
  • Abstract
    Currently classifying high-dimensional data is a very challenging problem. High dimensional feature spaces affect both accuracy and efficiency of supervised learning methods. To address this issue, we present a fast and efficient feature selection algorithm to facilitate classifying high-dimensional datasets as those appearing in Bioinformatics problems. Our method employs a Laplacian score ranking to reduce the search space, combined with a simple wrapper strategy to find a good feature subset of uncorrelated features, giving as result a hybrid feature selection method which is useful for high dimensional spaces. Some experiments have been carried out on gene microarray datasets to demonstrate the effectiveness and robustness of the proposed method.
  • Keywords
    bioinformatics; biological techniques; data reduction; feature extraction; genetics; learning (artificial intelligence); molecular biophysics; pattern classification; Laplacian score ranking; bioinformatics problems; biomedical datasets; feature selection algorithm; feature subset; gene microarray datasets; high dimensional data classification; high dimensional feature spaces; hybrid feature selection method; search space reduction; supervised learning methods; uncorrelated features; wrapper strategy; Accuracy; Bioinformatics; Cancer; Classification algorithms; Filtering algorithms; Laplace equations; Machine learning; Feature selection; high-dimensional spaces; supervised classification;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2012 IEEE Symposium on
  • Conference_Location
    San Diego, CA
  • Print_ISBN
    978-1-4673-1190-8
  • Type

    conf

  • DOI
    10.1109/CIBCB.2012.6217224
  • Filename
    6217224