DocumentCode
2319540
Title
Hybrid feature selection method for biomedical datasets
Author
Solorio-Fernández, Saúl ; Trinidad, José Fco Martínez- ; Carrasco-Ochoa, Jesús Ariel ; Zhang, Yan-Qing
Author_Institution
Comput. Sci. Dept., Nat. Inst. for Astrophys., Opt. & Electron., Tonantzintla, Mexico
fYear
2012
fDate
9-12 May 2012
Firstpage
150
Lastpage
155
Abstract
Currently classifying high-dimensional data is a very challenging problem. High dimensional feature spaces affect both accuracy and efficiency of supervised learning methods. To address this issue, we present a fast and efficient feature selection algorithm to facilitate classifying high-dimensional datasets as those appearing in Bioinformatics problems. Our method employs a Laplacian score ranking to reduce the search space, combined with a simple wrapper strategy to find a good feature subset of uncorrelated features, giving as result a hybrid feature selection method which is useful for high dimensional spaces. Some experiments have been carried out on gene microarray datasets to demonstrate the effectiveness and robustness of the proposed method.
Keywords
bioinformatics; biological techniques; data reduction; feature extraction; genetics; learning (artificial intelligence); molecular biophysics; pattern classification; Laplacian score ranking; bioinformatics problems; biomedical datasets; feature selection algorithm; feature subset; gene microarray datasets; high dimensional data classification; high dimensional feature spaces; hybrid feature selection method; search space reduction; supervised learning methods; uncorrelated features; wrapper strategy; Accuracy; Bioinformatics; Cancer; Classification algorithms; Filtering algorithms; Laplace equations; Machine learning; Feature selection; high-dimensional spaces; supervised classification;
fLanguage
English
Publisher
ieee
Conference_Titel
Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2012 IEEE Symposium on
Conference_Location
San Diego, CA
Print_ISBN
978-1-4673-1190-8
Type
conf
DOI
10.1109/CIBCB.2012.6217224
Filename
6217224
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