DocumentCode :
2349802
Title :
PADMA Database: Pathogen Associated Drosophila MicroArray Database
Author :
Kawaguchi, Akira ; Mondal, Ariful ; Montesdeoca, Nelson ; Govind, Shubha ; Lee, Mark J.
Author_Institution :
Comput. Sci. Dept., City Coll. of New York, New York, NY, USA
fYear :
2009
fDate :
2-4 April 2009
Firstpage :
63
Lastpage :
66
Abstract :
We present the development of new database, called PADMA, for easy retrieval of genes whose expression is altered by parasitoid infections. The database also houses gene expression data sets from Drosophila blood cells after immune activation. The PADMA system will allow a user to compare genes whose expression is altered after infection by a single or multiple pathogens. Such capability is not publicly available to the Drosophila research community. The PADMA system is currently being tested in-house for public release. We describe the motivation for this research and a detailed account on the design of the database to promote data sharing among users and applications in the context of genome biology.
Keywords :
genomics; information retrieval; medical information systems; Drosophila blood cells; PADMA database; data retrieval; data sharing; gene expression; genome biology; pathogen associated Drosophila microarray database; Bioinformatics; Blood; Cells (biology); Databases; Gene expression; Genomics; Immune system; Information retrieval; Pathogens; System testing; biology data-warehouse; biology database; drosophila gene data; drosophila microarray; gene database;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Computing, Engineering and Information, 2009. ICC '09. International Conference on
Conference_Location :
Fullerton, CA
Print_ISBN :
978-0-7695-3538-8
Type :
conf
DOI :
10.1109/ICC.2009.62
Filename :
5328928
Link To Document :
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