DocumentCode
2350538
Title
An ontology-empowered model for annotating protein-protein interaction data: a case study for budding yeast
Author
Shaban-Nejad, Arash ; Haarslev, Volker
Author_Institution
Dept. Computer Science and Software Eng., Concordia University, Montreal, Quebec, H3H2J8, Canada
fYear
2008
fDate
13-15 July 2008
Firstpage
357
Lastpage
362
Abstract
This paper reports on our experience in modeling and employing ontology-inferred knowledge to support and improve data mining tasks of yeast protein interactions for knowledge discovery. This objective has been accomplished by providing simplified access to units of intersecting proteome data and information from different biological databases and bio-ontologies, and utilizing a logical framework to answer questions from biologists.
Keywords
Biological system modeling; Computer science; Data mining; Databases; Fungi; Gene expression; Ontologies; Organisms; Proteins; Scattering;
fLanguage
English
Publisher
ieee
Conference_Titel
Information Reuse and Integration, 2008. IRI 2008. IEEE International Conference on
Conference_Location
Las Vegas, NV, USA
Print_ISBN
978-1-4244-2659-1
Electronic_ISBN
978-1-4244-2660-7
Type
conf
DOI
10.1109/IRI.2008.4583057
Filename
4583057
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