DocumentCode
2375613
Title
Identification and function of new proteins in calcified endoskeleton: A new insight in the calcification mechanism of soft corals
Author
Rahman, M. Azizur ; Oomori, Tamotsu
Author_Institution
Dept. of Chem., Univ. of the Ryukyus, Okinawa
fYear
2008
fDate
15-18 Sept. 2008
Firstpage
1
Lastpage
7
Abstract
Understanding the functional properties of endoskeletal proteins in the calcification processes of soft corals is essential. However, separation of proteins from soft corals is difficult due to contamination by soft tissues and the high sensitivity of soft tissues to handling. We have resolved this problem and established a simple and effective method-electroelution treatment-for purifying proteins from soft corals. Here we applied this newly developed technique to successfully identify four proteins (MPL-1, MPL-2, MPL-3 and MPL-4) from the endoskeletal sclerites of soft coral, Lobophytum crassum as a model. Following this method, we identified a carbonic anhydrase (CA) domain in a soft coral; CA is a key enzyme in living organisms. We found that two CA proteins, which were purified by electroelution, could control the morphology of the CaCO3 crystals, and one of these is potentially involved in the process of biocalcification. We report here a single protein (MPL-2), which has both calcium-binding and CA activities and is responsible for CaCO3 nucleation and crystal growth. The sequence of protein MPL-2 was subjected to bioinformatics analysis involving identification of similarities to other animals´ protein. The function of proteins during bio-calcification was also studied by simulating the nucleation and growth of calcium carbonates in vitro. After precipitation of CaCO3 in the experimental design, the obtained crystals were characterized by X-Ray Diffraction (XRD). These findings suggest that the proteins, which were purified from the calcified sclerites, can control the morphology of CaCO3 crystals and are potentially involved in the process of bio-calcification.
Keywords
X-ray diffraction; calcium compounds; oceanographic techniques; CaCO3; Lobophytum crassum; X-Ray Diffraction; animals protein; biocalcification process; bioinformatics analysis; calcified endoskeleton proteins properties; calcium carbonate precipitation; calcium carbonates growth; carbonic anhydrase domain; crystal growth; electroelution treatment; experimental design; living organisms; nucleation; proteins function; proteins identification; proteins purifying; soft corals calcification mechanism; soft tissues; vitro; Animals; Biochemistry; Bioinformatics; Biological tissues; Calcium; Contamination; Crystals; Morphology; Organisms; Protein engineering;
fLanguage
English
Publisher
ieee
Conference_Titel
OCEANS 2008
Conference_Location
Quebec City, QC
Print_ISBN
978-1-4244-2619-5
Electronic_ISBN
978-1-4244-2620-1
Type
conf
DOI
10.1109/OCEANS.2008.5152121
Filename
5152121
Link To Document