• DocumentCode
    2375806
  • Title

    A new validity measure for a correlation-based fuzzy c-means clustering algorithm

  • Author

    Zhang, Mingrui ; Zhang, Wei ; Sicotte, Hugues ; Yang, Ping

  • Author_Institution
    Comput. Sci. Dept., Winona State Univ., Winona, MN, USA
  • fYear
    2009
  • fDate
    3-6 Sept. 2009
  • Firstpage
    3865
  • Lastpage
    3868
  • Abstract
    One of the major challenges in unsupervised clustering is the lack of consistent means for assessing the quality of clusters. In this paper, we evaluate several validity measures in fuzzy clustering and develop a new measure for a fuzzy c-means algorithm which uses a Pearson correlation in its distance metrics. The measure is designed with within-cluster sum of square, and makes use of fuzzy memberships. In comparing to the existing fuzzy partition coefficient and a fuzzy validity index, this new measure performs consistently across six microarray datasets. The newly developed measure could be used to assess the validity of fuzzy clusters produced by a correlation-based fuzzy c-means clustering algorithm.
  • Keywords
    biology computing; fuzzy set theory; genetics; pattern clustering; Pearson correlation; fuzzy c-means clustering; fuzzy partition coefficient; fuzzy validity index; unsupervised clustering; Algorithms; Cluster Analysis; Computational Biology; Fuzzy Logic; Gene Expression Profiling; Gene Expression Regulation; Genes, Fungal; Humans; Lung Neoplasms; Models, Statistical; Oligonucleotide Array Sequence Analysis; Pattern Recognition, Automated; Sequence Alignment; Software; Time Factors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2009. EMBC 2009. Annual International Conference of the IEEE
  • Conference_Location
    Minneapolis, MN
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-3296-7
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2009.5332582
  • Filename
    5332582