DocumentCode
2390783
Title
Exonic regions finding on DNA sequences using RLS algorithm and de noising with discrete wavelet
Author
Abbasi, Omid ; Rasi, Jafar
Author_Institution
Fac. of Emerging Technol. Eng., Univ. of Tabriz, Tabriz, Iran
fYear
2011
fDate
15-16 June 2011
Firstpage
66
Lastpage
70
Abstract
Identification of protein region on the DNA sequence using signal processing technique is one of the important topics in biosignal processing and bioinformatics area. In this paper a new method is presented in order to identify exonic regions on the DNA sequences. This method applies adaptive filter in order to identify period-3 region on DNA sequence. Thereinafter, discrete wavelet is applied to decrease the effect of noise in output spectrum too. This technique helps improve the identification accuracy. At the end of this paper the proposed algorithm is applied on two eukaryotic gene sequences and the output results are compared with another method and it shown how much the accuracy of identification is improved.
Keywords
DNA; bioinformatics; discrete wavelet transforms; medical signal detection; medical signal processing; signal denoising; DNA sequences; RLS algorithm; bioinformatics; biosignal processing; discrete wavelet; eukaryotic gene sequences; exonic region finding; period-3 region; protein region identification; signal denoising; signal processing technique; Accuracy; Adaptive filters; Bioinformatics; DNA; Discrete wavelet transforms; Noise; Signal processing algorithms; DNA; Discrete Wavelet Transform; RLS algorithm; adaptive filter; exon; period-3;
fLanguage
English
Publisher
ieee
Conference_Titel
Artificial Intelligence and Signal Processing (AISP), 2011 International Symposium on
Conference_Location
Tehran
Print_ISBN
978-1-4244-9833-8
Type
conf
DOI
10.1109/AISP.2011.5960986
Filename
5960986
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