DocumentCode :
2422650
Title :
Optimization and Parallelization of DFT and TDDFT in GAMESS on DoD HPC Machines
Author :
Lasinski, Michael E. ; Romero, Nichols A. ; Yau, Anthony D. ; Kedziora, Gary ; Blaudeau, Jean-Philippe ; Brown, Shawn T.
Author_Institution :
High Performance Technol. Inc., Reston, VA
fYear :
2008
fDate :
14-17 July 2008
Firstpage :
437
Lastpage :
441
Abstract :
The quantum chemistry package General Atomic and Molecular Electronic Structure System (GAMESS) is employed in the first-principles modeling of complex molecular systems by using the density functional theory (DFT) as well as a number of other post-Hartree-Fock (HF) methods. Both DFT and time-dependent DFT (TDDFT) are of particular interest to the Department of Defense (DoD) Computational Biology, Chemistry, and Materials Science (CCM). Millions of CPU hours per year are expended by GAMESS calculations on DoD high performance computing (HPC) systems. Therefore, any reduction in wall-clock time for these calculations will represent a significant saving in CPU hours. As part of this work, three areas for improvement were identified: 1) replacement of the exchange-correlation (XC) integration grid, 2) TDDFT parallelization, and 3) profiling and optimization of the DFT and TDDFT. We summarize the work performed in these task areas and present the resulting speed-up. Our software enhancements are available to the general public in the 11APR2008R1 version of GAMESS.
Keywords :
HF calculations; defence industry; density functional theory; mainframes; optimisation; parallel machines; quantum chemistry; Department of Defense; DoD HPC machines; GAMESS; density functional theory; exchange-correlation integration grid; first-principles modeling; general atomic and molecular electronic structure system; high performance computing; optimization; parallelization; post-Hartree-Fock methods; quantum chemistry package; time-dependent DFT; Biological system modeling; Chemistry; Computational biology; Density functional theory; Electronics packaging; Game theory; Hafnium; Molecular electronics; Packaging machines; Quantum mechanics;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
DoD HPCMP Users Group Conference, 2008. DOD HPCMP UGC
Conference_Location :
Seattle, WA
Print_ISBN :
978-1-4244-3323-0
Type :
conf
DOI :
10.1109/DoD.HPCMP.UGC.2008.7
Filename :
4755906
Link To Document :
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