• DocumentCode
    2442516
  • Title

    Altering steady-state probabilities in probabilistic Boolean networks

  • Author

    Pal, Ravindra ; Datta, Amitava ; Dougherty, Edward R.

  • Author_Institution
    Electr. & Comput. Eng., Texas A & M Univ., College Station, TX
  • fYear
    2006
  • fDate
    28-30 May 2006
  • Firstpage
    75
  • Lastpage
    76
  • Abstract
    External control of a genetic regulatory network is used for the purpose of avoiding undesirable states, such as those associated with disease. Heretofore, intervention has focused on finite-horizon control, i.e., control over a small number of stages. This paper considers the design of optimal infinite-horizon control for probabilistic Boolean networks (PBNs). The stationary policy obtained is independent of time and dependent on the current state. The average-cost-per-stage problem formulation is used to generate the stationary policy for a PBN constructed from melanoma gene-expression data. The results show that the stationary policiy obtained is capable of shifting the probability mass of the stationary distribution from undesirable states to desirable ones.
  • Keywords
    biocontrol; cellular biophysics; diseases; genetics; medical diagnostic computing; disease; genetic regulatory network; melanoma gene-expression data; optimal infinite horizon control; probabilistic Boolean networks; steady-state probabilities; Bioinformatics; Computer networks; Cost function; Diseases; Genetic algorithms; Genetic engineering; Genomics; H infinity control; Intelligent networks; Steady-state;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Genomic Signal Processing and Statistics, 2006. GENSIPS '06. IEEE International Workshop on
  • Conference_Location
    College Station, TX
  • Print_ISBN
    1-4244-0384-7
  • Electronic_ISBN
    1-4244-0385-5
  • Type

    conf

  • DOI
    10.1109/GENSIPS.2006.353163
  • Filename
    4161784