• DocumentCode
    2447884
  • Title

    Enhancing adaptive middleware for quantum chemistry applications with a database framework

  • Author

    Seshagiri, Lakshminarasimhan ; Wu, Meng-Shiou ; Sosonkina, Masha ; Zhang, Zhao ; Gordon, Mark S. ; Schmidt, Michael W.

  • Author_Institution
    Scalable Comput. Lab., Ames Lab., Ames, IA, USA
  • fYear
    2010
  • fDate
    19-23 April 2010
  • Firstpage
    1
  • Lastpage
    8
  • Abstract
    Quantum chemistry applications such as the General Atomic and Molecular Electronic Structure System (GAMESS) that can execute on a complex peta-scale parallel computing environment has a large number of input parameters that affect the overall performance. The application characteristics vary according to the input parameters. This is due to the difference in the usage of resources like network bandwidth, I/O and main memory, according to the input parameters. Effective execution of applications in a parallel computing environment that share such resources require some sort of adaptive mechanism to enable efficient usage of these resources. In our previous work, we have integrated GAMESS with an adaptive middleware NICAN (Network Information Conveyer and Application Notification) for dynamic adaptations during heavy load conditions that modify execution of GAMESS computations on a per-iteration basis. This leads to better application performance. In this research, we have expanded the structure of NICAN in order to include other input parameters based on which application performance can be controlled. The application performance has been analyzed on different architectures and a tuning strategy has been identified. A generic database framework has been incorporated in the existing NICAN mechanism so as to aid this tuning strategy.
  • Keywords
    chemistry computing; database management systems; middleware; molecular electronic states; parallel processing; quantum chemistry; NICAN mechanism; adaptive middleware; database framework; general atomic and molecular electronic structure system; network information conveyer and application notification; peta-scale parallel computing environment; quantum chemistry; tuning strategy; Adaptive systems; Bandwidth; Chemistry; Computer networks; Databases; Games; Middleware; Molecular electronics; Parallel processing; Quantum computing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Parallel & Distributed Processing, Workshops and Phd Forum (IPDPSW), 2010 IEEE International Symposium on
  • Conference_Location
    Atlanta, GA
  • Print_ISBN
    978-1-4244-6533-0
  • Type

    conf

  • DOI
    10.1109/IPDPSW.2010.5470760
  • Filename
    5470760