DocumentCode
2463929
Title
QSAR Studies on Toxicity of Organic Compounds to Chlorella vulgaris
Author
Lv, Xin-Qi ; Zhang, Yun-Tao
Author_Institution
Inst. of Appl. Chem., China West Normal Univ., Nanchong, China
Volume
3
fYear
2010
fDate
16-17 Dec. 2010
Firstpage
119
Lastpage
122
Abstract
The quantitative structure-activity relationships (QSAR) studies on toxicity of 91 organic compounds to Chlorella vulgaris have been performed by using ν-support vector machine(ν-SVM) algorithm and taking the 2D-autocorrelation descriptors as the structural parameters based on variable selection with particle swarm optimization(PSO) methed. The correlation coefficient(R2) and Qcv2 of PSO-ν-SVM model in the training set are respectively 0.9469 and 0.7216, and Ra2 in the test set is 0.9446 while the R2, Qcv2 and Ra2 of training set and test set of the reference model are 0.9340, 0.9090 and 0.9290, respectively. The result shows that the QSAR model has better stability and prediction ability, so this model is a good reference for the study on toxicity of organic compounds to Chlorella vulgaris.
Keywords
biology computing; microorganisms; organic compounds; particle swarm optimisation; support vector machines; toxicology; 2D-autocorrelation descriptors; Chlorella vulgaris; QSAR; correlation coefficient; organic compound toxicity; particle swarm optimization; prediction ability; quantitative structure-activity relationship; structural parameters; training set; v-support vector machine algorithm; variable selection; Biological system modeling; Correlation; Data models; Input variables; Organic compounds; Testing; Training; Chlorella vulgaris; PSO; QSAR; v-SVM;
fLanguage
English
Publisher
ieee
Conference_Titel
Intelligent Systems (GCIS), 2010 Second WRI Global Congress on
Conference_Location
Wuhan
Print_ISBN
978-1-4244-9247-3
Type
conf
DOI
10.1109/GCIS.2010.29
Filename
5709337
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