Title :
Protein secondary structures prediction using data fusion approach
Author :
Chu, Yen-Wei ; Yu, Chin-Sheng ; Ng, Hui-Fuang
Author_Institution :
Dept. of Bioinf., Asia Univ., Wufeng
Abstract :
The importance of secondary protein structures is to help us to recognize many biological features, such as the structure and function of a protein, the evolutionary relation between proteins, and protein classification. Unfortunately, the secondary protein structures are hard to get from experimental analysis, and most researchers usually use predictive information instead of real structures. For protein secondary structure prediction, this research takes the predictive results from PSIPRED and PROF as the profile into the two-stage data fusion mechanism. The successive stage will integrate first stage outputs with our schemas. By performing the new approach, the accuracy of Q3 can be improved 5% more than the worst methods (PSIPRED or PROF) in the RS126 and CB513.
Keywords :
bioinformatics; pattern classification; proteins; sensor fusion; biological features; data fusion; evolutionary relation; protein classification; protein secondary structures prediction; two-stage data fusion mechanism; Asia; Automation; Bioinformatics; Computer science; Data engineering; Databases; Decision support systems; Genetic algorithms; Intelligent control; Protein engineering; clustering; data mining; genetic algorithms; knowledge discovery; protein secondary structure;
Conference_Titel :
Intelligent Control and Automation, 2008. WCICA 2008. 7th World Congress on
Conference_Location :
Chongqing
Print_ISBN :
978-1-4244-2113-8
Electronic_ISBN :
978-1-4244-2114-5
DOI :
10.1109/WCICA.2008.4593211