Title :
NOVEL CELL SEGMENTATION AND ONLINE LEARNING ALGORITHMS FOR CELL PHASE IDENTIFICATION IN AUTOMATED TIME-LAPSE MICROSCOPY
Author :
Wang, Meng ; Zhou, Xiaobo ; Li, Fuhai ; Huckins, Jeremy ; King, Randy W. ; Wong, Stephen T C
Author_Institution :
HCNR-Center for Bioinf., Harvard Med. Sch., Boston, MA
Abstract :
Automated identification of cell cycle phases captured via fluorescent microscopy technique is very important for cell cycle understanding and drug discovery. In this paper, we propose a novel cell detection method that utilizes both the intensity and shape information of cell to improve the segmentation quality. In contrast to conventional off-line learning algorithms for classification, our study necessitates the on-line adaptivity to accommodate the ever-changing experimental conditions. An online support vector classifier (OSVC) is thus proposed, which features the removal of support vectors from the old model and assigning the new training examples with different weights according to their importance. Experimental results show the proposed system is effective for cell imaging segmentation and cell phase identification in time-lapse microscopy
Keywords :
biomedical optical imaging; cellular biophysics; computer vision; drugs; fluorescence; image segmentation; learning (artificial intelligence); medical image processing; optical microscopy; pattern classification; support vector machines; automated cell identification; automated time-lapse microscopy; cell cycle phases; cell detection method; cell phase identification; cell segmentation; drug discovery; fluorescent microscopy; imaging segmentation; online adaptivity; online learning algorithms; online support vector classifier; support vector removal; training examples; Algorithm design and analysis; Bioinformatics; Biological cells; Biomedical imaging; Cells (biology); Drugs; Hospitals; Image segmentation; Microscopy; Shape;
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on
Conference_Location :
Arlington, VA
Print_ISBN :
1-4244-0672-2
Electronic_ISBN :
1-4244-0672-2
DOI :
10.1109/ISBI.2007.356789