Title :
AUTOMATIC SEGMENTATION OF THE BONES FROM MR IMAGES OF THE KNEE
Author :
Fripp, Jurgen ; Ourselin, Sebastien ; Warfield, Simon K. ; Crozier, Stuart
Author_Institution :
BioMedIA Lab., CSIRO ICT Centre, Brisbane, Qld.
Abstract :
We present and validate a hybrid segmentation scheme based around 3D active shape models, which is used to automatically segment the three bones in the knee joint. This scheme is automatically initialised using an affine registration to an atlas. The accuracy and robustness of the approach was experimentally validated using an MR database of 20 fat suppressed spoiled gradient recall images. A median dice similarity coefficient (DSC) of 0.89, 0.96 and 0.96 was obtained for the patella, tibia and femur which illustrates the accuracy of the approach. The robustness of this scheme to initialisation was validated by segmenting each knee image 19 times, each time using a different image in the database as the atlas. An overall segmentation failure rate (DSC<0.75) of only 3.60% shows that the scheme was robust to initialisation
Keywords :
biomedical MRI; bone; image registration; image segmentation; medical image processing; orthopaedics; physiological models; visual databases; affine registration; automatic segmentation; bone segmentation; bones; dice similarity coefficient; fat gradient recall images; femur; hybrid segmentation scheme; knee; knee image segmentation; knee joint; magnetic resonance database; magnetic resonance images; patella; segmentation failure rate; spoiled gradient recall images; suppressed gradient recall images; three-dimensional active shape models; tibia; Active shape model; Area measurement; Australia; Biomedical measurements; Bones; Image databases; Image segmentation; Knee; Robustness; Thickness measurement;
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on
Conference_Location :
Arlington, VA
Print_ISBN :
1-4244-0672-2
Electronic_ISBN :
1-4244-0672-2
DOI :
10.1109/ISBI.2007.356857