Title :
Visualizing Analysis of the Rice Protein OsPCBP and Its Homogenous Proteins Based on the Hydrophobicity
Author :
Zhang Qiusheng ; Xu Binglian
Author_Institution :
Coll. of Life Sci., Ludong Univ., Yantai, China
Abstract :
After the hydrophobicity sequences of the rice protein OsPCBP and its homogenous proteins were treated, the existing region of difference is found. The results are identical with the data obtained through the sequence alignment. In addition, the continuous wavelet transform with Mexican cap wavelet was carried out on the signal obtained by connecting the dealed hydrophobicity sequences of the homogenous proteins. The similarity of the signal displayed in the graph of the wavelet transform coefficients reflects the similarity of the homogneous proteins.
Keywords :
bioinformatics; hydrophobicity; molecular biophysics; proteins; wavelet transforms; Mexican cap wavelet; OsPCBP; continuous wavelet transform; homogenous proteins; hydrophobicity sequences; rice protein; sequence alignment; visualizing analysis; Amino acids; Bioinformatics; Continuous wavelet transforms; Educational institutions; Least squares approximation; Proteins; Signal analysis; Visualization; Wavelet analysis; Wavelet transforms;
Conference_Titel :
Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
Conference_Location :
Beijing
Print_ISBN :
978-1-4244-2901-1
Electronic_ISBN :
978-1-4244-2902-8
DOI :
10.1109/ICBBE.2009.5163750
