Visualizing Analysis of the Rice Protein OsPCBP and Its Homogenous Proteins Based on the Hydrophobicity

Author

Zhang Qiusheng ; Xu Binglian

Author_Institution

Coll. of Life Sci., Ludong Univ., Yantai, China

fYear

2009

fDate

11-13 June 2009

Firstpage

1

Lastpage

3

Abstract

After the hydrophobicity sequences of the rice protein OsPCBP and its homogenous proteins were treated, the existing region of difference is found. The results are identical with the data obtained through the sequence alignment. In addition, the continuous wavelet transform with Mexican cap wavelet was carried out on the signal obtained by connecting the dealed hydrophobicity sequences of the homogenous proteins. The similarity of the signal displayed in the graph of the wavelet transform coefficients reflects the similarity of the homogneous proteins.

Keywords

bioinformatics; hydrophobicity; molecular biophysics; proteins; wavelet transforms; Mexican cap wavelet; OsPCBP; continuous wavelet transform; homogenous proteins; hydrophobicity sequences; rice protein; sequence alignment; visualizing analysis; Amino acids; Bioinformatics; Continuous wavelet transforms; Educational institutions; Least squares approximation; Proteins; Signal analysis; Visualization; Wavelet analysis; Wavelet transforms;

fLanguage

English

Publisher

ieee

Conference_Titel

Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on

Conference_Location

Beijing

Print_ISBN

978-1-4244-2901-1

Electronic_ISBN

978-1-4244-2902-8

Type

conf

DOI

10.1109/ICBBE.2009.5163750

Filename

5163750