DocumentCode
2528914
Title
ECOME: a simple model for an evolving consumption web
Author
Bystroff, Christopher ; DeLuca, Sam ; McDaniel, Carl N.
Author_Institution
Biol. Dept., Rensselaer Polytech. Inst., Troy, NY, USA
fYear
2005
fDate
8-11 Aug. 2005
Firstpage
260
Lastpage
261
Abstract
ECOME is an interactive, graph-based model for simulating an evolving, closed consumption web. It demonstrates the fundamental behavior of a global ecosystem over evolutionary time using well-established ecological/evolutionary principles. Nodes in the graph send biomass along weighted, directed edges. New nodes evolve by speciation and disappear when biomass (i.e. population) shrinks to zero. Consumption rates, predator/prey relationships, and speciation rates are user-defined, following theoretic-distributions. The output shows the biomass and biodiversity over time for up to five trophic levels. Using this simple system, we demonstrate that closed ecosystems are inherently unstable in the absence of evolution or in the presence of a single, hyper-changing species, but are dynamically stable and robust to perturbations when the evolution rates for all species follow a normal distribution. Our new application provides provocative lessons for biology students during a time of mass extinction.
Keywords
bioenergy conversion; biology computing; client-server systems; ecology; evolution (biological); graph theory; perturbation theory; predator-prey systems; Web ECOME; biodiversity; biomass; consumption rate; ecosystem; evolutionary principle; global ecosystem; graph-based model; hyper-changing species; mass extinction; perturbation; predator-prey relationship; speciation rate; Animals; Atmosphere; Atmospheric modeling; Biodiversity; Biological system modeling; Biomass; Computational biology; Ecosystems; Evolution (biology); Kernel;
fLanguage
English
Publisher
ieee
Conference_Titel
Computational Systems Bioinformatics Conference, 2005. Workshops and Poster Abstracts. IEEE
Print_ISBN
0-7695-2442-7
Type
conf
DOI
10.1109/CSBW.2005.56
Filename
1540622
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