DocumentCode :
2568521
Title :
Structural properties of hub proteins
Author :
Cukuroglu, Engin ; Ozkirimli, Elif ; Keskin, Ozlem
Author_Institution :
Center for Comput. Biol. & Bioinf., Koc Univ., Istanbul, Turkey
fYear :
2010
fDate :
20-22 April 2010
Firstpage :
194
Lastpage :
196
Abstract :
Protein-protein interaction networks are scale free networks with a few hub proteins that have many interaction partners in the network. In this work, we examined the flexibility of the hubs by using a structural perspective and compared date hubs, which bind their partners at different times, and party hubs, which bind their partners simultaneously, with non hub proteins. The flexibility of the proteins is evaluated using temperature factors. Party hubs are found to be more flexible than date hubs, which in turn are more flexible than non-hub proteins. These may explain how a hub interacts with its partners specifically.
Keywords :
complex networks; molecular biophysics; molecular configurations; proteins; hub flexibility; hub protein structural properties; interaction partners; protein-protein interaction networks; scale free networks; Amino acids; Bioinformatics; Biological processes; Cellular networks; Chemical engineering; Computational biology; Immune system; Joining processes; Protein engineering; Temperature;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Health Informatics and Bioinformatics (HIBIT), 2010 5th International Symposium on
Conference_Location :
Antalya
Print_ISBN :
978-1-4244-5968-1
Type :
conf
DOI :
10.1109/HIBIT.2010.5478881
Filename :
5478881
Link To Document :
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