Title :
A methodology to enhance the semantics of links between PubMed publications and markers in the human genome
Author :
Lash, Alex ; Lee, Woei-Jyh ; Raschid, Louiqa
Author_Institution :
Comput. Biol. Center, Memorial Sloan-Kettering Cancer Center, New York, NY, USA
Abstract :
Links in life science sources capture important biological knowledge. However, current simple physical link implementations do not explicitly represent this knowledge so that it can be easily shared among scientists. We develop a methodology for link extraction and generation, and link labeling to produce an enhanced e-link. The e-link associates each existing link with a link label that captures semantics of the link. We develop a machine assisted tool for curators to produce e-links and we develop a search interface for biologists to discover interesting e-links.
Keywords :
biology computing; genetics; molecular biophysics; semantic networks; PubMed publications; enhanced e-link; human genome markers; life science sources; link extraction; link generation; link labeling; machine assisted tool; semantics; Bioinformatics; Biology computing; Cancer; Computational biology; Data mining; Educational institutions; Filtering; Genomics; Humans; Labeling;
Conference_Titel :
Bioinformatics and Bioengineering, 2005. BIBE 2005. Fifth IEEE Symposium on
Print_ISBN :
0-7695-2476-1
DOI :
10.1109/BIBE.2005.3
