• DocumentCode
    2613707
  • Title

    Biomedical Implications of Robust Biomeasurement of Transient Modifications in Cells by Flow Cytometry

  • Author

    Sachidanandham, Ramaiah ; Karina, Gin Yew-Hoong

  • Author_Institution
    Sch. of Civil & Environ. Eng., Nanyang Technol. Univ., Singapore, Singapore
  • fYear
    2009
  • fDate
    17-20 April 2009
  • Firstpage
    451
  • Lastpage
    455
  • Abstract
    Despite the fact that flow cytometry has been a proven biomedical technology [e.g. Ref. 1], its applications in understanding the novel and frontier aspects of human infections and infectious agents continue to emerge. Here we present the challenges, experience and accomplishments in the transient measurements of cells by flow cytometry and cell separation by fluorescence activated cell sorting (FACS). In contrast to the conventional method of characterization of novel or natural human pathogens, gene sequencing and neighbor joining tree have been considered more robust. We have used these approaches involving 16s rRNA gene sequencing of human pathogens (sequences with accession numbers EF419181, EF419183 & EF419182 deposited in the GenBank, USA) and neighbor joining tree to identify and characterize human pathogens (strains deposited in the publicly accessible international culture collections namely NCIMB, Scotland & NCCB, Netherlands). We found that combining multiparametric flow cytometry and FACS unveiled key information on the stress response of human pathogens. With the use of flow cytometry, we report for the first time, the phenomenon of DNAdh in Acinetobacter baylyi, an important nosocomial pathogen in humans. We forecast that DNAdh offers multilayer defense for human pathogens under stress. Furthermore, our strategies offer platform for disclosing genetic pathway(s) of dormancy and DNAdh, for the possible design of new generation of drugs and antimicrobials.
  • Keywords
    DNA; biological fluid dynamics; biological techniques; biomedical measurement; cellular biophysics; diseases; drugs; fluorescence; genetics; molecular biophysics; Acinetobacter baylyi; DNAdh; FACS; antimicrobials; biomedical applications; biomedical technology; cell separation; cells; dormancy; drugs; flow cytometry; fluorescence activated cell sorting; genetic pathway; natural human pathogens; neighbor joining tree; nosocomial pathogen; rRNA gene sequencing; robust biomeasurement; strain deposition; transient modifications; Biomedical measurements; Capacitive sensors; Fluid flow measurement; Fluorescence; Humans; Nonhomogeneous media; Pathogens; Robustness; Sorting; Stress; Bioinformatics; Biomeasurement; Biomedical engineering; DNAdh; FACS; ISPCR; flow cytometry; multilayer defense; neighbor joining tree;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer Science and Information Technology - Spring Conference, 2009. IACSITSC '09. International Association of
  • Conference_Location
    Singapore
  • Print_ISBN
    978-0-7695-3653-8
  • Type

    conf

  • DOI
    10.1109/IACSIT-SC.2009.18
  • Filename
    5169392