Title :
Wiki-Genome: A model-driven genome data management environment
Author :
Ferrandis, Martínez ; María, Ana
Author_Institution :
Centro de Investig. en Metodos de Produccion de Software, Univ. Politec. de Valencia, Valencia, Spain
Abstract :
The genomic data chaos is a relevant problem in the field of genomics. Therefore, the definition of a solid knowledge basis in this field is essential. Ontologies provide a precise and unambiguous specification when describing domains, offering a way to encode the knowledge of different areas of practice. The Wiki-Genome project aims to exploit this potential to provide a standard classification in the genomic field that could be used by different projects on an individual basis or jointly, facilitating communication between different researchers. The Wiki-Genome project is based on the description of a top-level ontology, its implementation on a physical level and the various tools available to provide data management characterized by this ontology. The goal of the Wiki-Genome project is to offer a holistic approach to the field of genomics that ends with the genomic data chaos, offering a genomic information management system, for the exploitation and introduction of data, guided by models.
Keywords :
Web sites; biology computing; genomics; ontologies (artificial intelligence); Wiki-Genome project; genomic information management system; genomics; model-driven genome data management environment; ontologies; solid knowledge basis; standard classification; top-level ontology; Bioinformatics; Databases; Genomics; Information systems; Ontologies; Unified modeling language; conceptual modelling; genomics; information system; ontology; wiki;
Conference_Titel :
Research Challenges in Information Science (RCIS), 2012 Sixth International Conference on
Conference_Location :
Valencia
Print_ISBN :
978-1-4577-1936-3
Electronic_ISBN :
2151-1349
DOI :
10.1109/RCIS.2012.6240460