Title :
Molecular Modeling and Evaluation of Novel Dibenzopyrrole Derivatives as Telomerase Inhibitors and Potential Drug for Cancer Therapy
Author :
Kalathiya, Umesh ; Padariya, Monikaben ; Baginski, Maciej
Author_Institution :
Dept. of Pharm. Technol. & Biochem., Gdansk Univ. of Technol., Gdansk, Poland
Abstract :
During previous years, many studies on synthesis, as well as on anti-tumor, anti-inflammatory and anti-bacterial activities of the pyrazole derivatives have been described. Certain pyrazole derivatives exhibit important pharmacological activities and have proved to be useful template in drug research. Considering importance of pyrazole template, in current work the series of novel inhibitors were designed by replacing central ring of acridine with pyrazole ring. These heterocyclic compounds were proposed as a new potential base for telomerase inhibitors. Obtained dibenzopyrrole structure was used as a novel scaffold structure and extension of inhibitors was done by different functional groups. Docking of newly designed compounds in the telomerase active site (telomerase catalytic subunit TERT) was carried out. All dibenzopyrrole derivatives were evaluated by three docking programs: CDOCKER, Ligandfit docking (Scoring Functions) and AutoDock. Compound C_9g, C_9k and C_9l performed best in comparison to all designed inhibitors during the docking in all methods and in interaction analysis. Introduction of pyrazole and extension of dibenzopyrrole in compounds confirm that such compound may act as potential telomerase inhibitors.
Keywords :
biochemistry; bioinformatics; cancer; catalysis; drug delivery systems; drugs; enzymes; inhibitors; molecular biophysics; molecular configurations; tumours; AutoDock; CDOCKER; Compound C_9g; Compound C_9k; Compound C_9l; Ligandfit docking; acridine; antibacterial activities; antiinflammatory activities; antitumor activities; cancer therapy; dibenzopyrrole derivatives evaluation; dibenzopyrrole structure; docking programs; drug research template; functional groups; heterocyclic compounds; interaction analysis; molecular modeling; pharmacological activities; potential drug; pyrazole ring; scaffold structure; scoring functions; telomerase active site; telomerase catalytic subunit; telomerase inhibitors; Cancer; Computational biology; DNA; Molecular biomarkers; Proteins; Tumors; AutoDock; CDOCKER; Dibenzopyrrole; Ligandfit; Pyrazole; Telomerase inhibitors; anti-tumor activity; binding affinity; molecular docking; scoring functions;
Journal_Title :
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
DOI :
10.1109/TCBB.2014.2326860