DocumentCode
2702161
Title
Enhancing the computation of approximate solutions of the protein structure determination problem through global constraints for discrete crystal lattices
Author
Palu, A.D. ; Pontelli, E. ; Dovier, A.
Author_Institution
Univ. di Parma, Parma
fYear
2007
fDate
2-4 Nov. 2007
Firstpage
38
Lastpage
44
Abstract
This paper investigates alternative global constraints that can be introduced in a constraint solver over discrete crystal lattices. The objective is to enhance the efficiency of lattice solvers in dealing with the construction of approximate solutions of the protein structure determination problem. The paper discusses various alternatives and provides preliminary results concerning the computational properties of the different global constraints.
Keywords
biology computing; lattice constants; molecular configurations; proteins; approximate solutions; discrete crystal lattices; global constraints; protein structure determination; Amino acids; Chemical compounds; Computer science; Constraint optimization; Context modeling; FCC; Lattices; Polymers; Programming profession; Proteins;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Biomedicine Workshops, 2007. BIBMW 2007. IEEE International Conference on
Conference_Location
Fremont, CA
Print_ISBN
978-1-4244-1604-2
Type
conf
DOI
10.1109/BIBMW.2007.4425398
Filename
4425398
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