• DocumentCode
    27125
  • Title

    On-Chip Systolic Networks for Real-Time Tracking of Pairwise Correlations Between Neurons in a Large-Scale Network

  • Author

    Bo Yu ; Chan, Rosa H. M. ; Mak, Terrence ; Yihe Sun ; Chi-Sang Poon

  • Author_Institution
    Tsinghua Nat. Lab. for Inf. Sci. & Technol., Tsinghua Univ., Beijing, China
  • Volume
    60
  • Issue
    1
  • fYear
    2013
  • fDate
    Jan. 2013
  • Firstpage
    198
  • Lastpage
    202
  • Abstract
    The correlation map of neurons emerges as an important mathematical framework for a spectrum of applications including neural circuit modeling, neurologic disease bio-marking and neuroimaging. However, constructing a correlation map is computationally expensive, especially when the number of neurons is large. This paper proposes a hardware design using hierarchical systolic arrays to calculate pairwise correlations between neurons. Through mapping a computationally efficient algorithm for cross-correlation onto a massively parallel structure, the hardware is able to construct the correlation maps in a much shorter time. The proposed architecture was evaluated using a field programmable gate array. The results show that the computational delay of the hardware for constructing correlation maps increases linearly with the number of neurons, whereas the growth of delay is quadratic for a software-based serial approach. Also, the efficiency of our method for detecting abnormal behaviors of neural circuits is demonstrated by analyzing correlation maps of retinal neurons.
  • Keywords
    eye; field programmable gate arrays; neural nets; neurophysiology; systolic arrays; computationally efficient algorithm; field programmable gate array; hardware design; hierarchical systolic arrays; large scale network; massively parallel structure; neural circuit modeling; neuroimaging; neurologic disease biomarking; neuron correlation map; on chip systolic networks; pairwise neuron correlations; real time tracking; retinal neurons; Computer architecture; Correlation; Delay; Hardware; Logic gates; Neurons; Retina; Correlation map; FPGA; network monitoring and analysis; systolic array; Action Potentials; Algorithms; Animals; Computer Simulation; Mice; Models, Neurological; Nerve Net; Neurons; Retina;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2012.2210219
  • Filename
    6248684