Title :
On-Chip Systolic Networks for Real-Time Tracking of Pairwise Correlations Between Neurons in a Large-Scale Network
Author :
Bo Yu ; Chan, Rosa H. M. ; Mak, Terrence ; Yihe Sun ; Chi-Sang Poon
Author_Institution :
Tsinghua Nat. Lab. for Inf. Sci. & Technol., Tsinghua Univ., Beijing, China
Abstract :
The correlation map of neurons emerges as an important mathematical framework for a spectrum of applications including neural circuit modeling, neurologic disease bio-marking and neuroimaging. However, constructing a correlation map is computationally expensive, especially when the number of neurons is large. This paper proposes a hardware design using hierarchical systolic arrays to calculate pairwise correlations between neurons. Through mapping a computationally efficient algorithm for cross-correlation onto a massively parallel structure, the hardware is able to construct the correlation maps in a much shorter time. The proposed architecture was evaluated using a field programmable gate array. The results show that the computational delay of the hardware for constructing correlation maps increases linearly with the number of neurons, whereas the growth of delay is quadratic for a software-based serial approach. Also, the efficiency of our method for detecting abnormal behaviors of neural circuits is demonstrated by analyzing correlation maps of retinal neurons.
Keywords :
eye; field programmable gate arrays; neural nets; neurophysiology; systolic arrays; computationally efficient algorithm; field programmable gate array; hardware design; hierarchical systolic arrays; large scale network; massively parallel structure; neural circuit modeling; neuroimaging; neurologic disease biomarking; neuron correlation map; on chip systolic networks; pairwise neuron correlations; real time tracking; retinal neurons; Computer architecture; Correlation; Delay; Hardware; Logic gates; Neurons; Retina; Correlation map; FPGA; network monitoring and analysis; systolic array; Action Potentials; Algorithms; Animals; Computer Simulation; Mice; Models, Neurological; Nerve Net; Neurons; Retina;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2012.2210219