DocumentCode
2719789
Title
Bifurcation analyses in the cyanobacterial circadian clock model
Author
Kurosawa, Gen ; Aihara, Kazuyuki ; Iwasa, Yoh
Author_Institution
Aihara Complexity Modelling Project, Tokyo
fYear
2006
fDate
38899
Firstpage
1
Lastpage
2
Abstract
A conspicuous property of the circadian clock in cyanobacteria is that endogenous rhythm continues when protein abundances are kept constant either in the presence of translation and transcription inhibitors. Here we extend the study of a model recently proposed for the cyanobacterial circadian clock. We theoretically show that balanced ratio among KaiA, KaiB, and KaiC proteins is required for the generation of oscillations by using our model recently proposed. Bifurcation analyses show that cooperativity for the mutual inhibitory process in the model does not always enhance the generation of oscillations though cooperativity for the inhibition of transcription and in the nuclear transport of clock proteins in Goodwin type models extensively studied is known to always enhance the generation of oscillations
Keywords
bifurcation; biochemistry; cellular biophysics; circadian rhythms; microorganisms; molecular biophysics; oscillations; physiological models; proteins; Goodwin type models; KaiA proteins; KaiB proteins; KaiC proteins; bifurcation analysis; clock proteins; cyanobacterial circadian clock model; mutual inhibitory process; nuclear transport; oscillations; transcription inhibitors; translation inhibitors; Bifurcation; Biological system modeling; Circadian rhythm; Clocks; Equations; Gene expression; In vitro; Kinetic theory; Nuclear power generation; Proteins;
fLanguage
English
Publisher
ieee
Conference_Titel
Life Science Systems and Applications Workshop, 2006. IEEE/NLM
Conference_Location
Bethesda, MD
Print_ISBN
1-4244-0277-8
Electronic_ISBN
1-4244-0278-6
Type
conf
DOI
10.1109/LSSA.2006.250394
Filename
4015795
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