DocumentCode
2719823
Title
Turbo Data Integration for Uncovering Gene Networks
Author
Huang, Yufei ; Yin, Yufang
Author_Institution
Dept. of Electr. & Comput. Eng., Texas Univ., San Antonio, TX
fYear
2006
fDate
38899
Firstpage
1
Lastpage
2
Abstract
Data integration is an important task in the gene network research. In this paper, the integration of two microarray datasets for uncovering gene networks is considered. The premise of data integration is that different datasets all carry information about the common networks of interest. Thus, through data fusion, the authors hope to combine information from different sources to gain improved understanding about the networks. Inspired by the similarity between the data integration problem and turbo decoding in wireless communications, a Bayesian data integration framework based on a turbo approach was proposed. The proposed algorithm was tested on two microarray datasets of 10 genes in the yeast cell cycle
Keywords
Bayes methods; biology computing; cellular biophysics; genetics; sensor fusion; Bayesian methods; data fusion; gene networks; microarray datasets; turbo data integration; turbo decoding; yeast cell cycle; Approximation algorithms; Approximation error; Bayesian methods; Computer networks; Data models; Decoding; Distributed computing; Equations; Network topology; Wireless communication;
fLanguage
English
Publisher
ieee
Conference_Titel
Life Science Systems and Applications Workshop, 2006. IEEE/NLM
Conference_Location
Bethesda, MD
Print_ISBN
1-4244-0277-8
Electronic_ISBN
1-4244-0278-6
Type
conf
DOI
10.1109/LSSA.2006.250397
Filename
4015798
Link To Document