Title :
Dictionary model for the analysis of E. Coli promoter regions
Author :
Sabatti, Chiara ; Rohlin, Lars ; Liao, James
Author_Institution :
Dept. of Stat. & Human Genetics, California Univ., Los Angeles, CA, USA
Abstract :
We illustrate the application of the dictionary model to a problem of data analysis concerning E. Coli: the estimation of the location of binding sites in the genome of a collection of known regulatory proteins. We also describe a more general model that simultaneously analyzes gene expression array and sequence data.
Keywords :
arrays; data analysis; genetics; microorganisms; physiological models; proteins; E. Coli promoter regions; binding sites location; data analysis; data sequence; dictionary model; gene expression array; genome; regulatory proteins collections; Bioinformatics; Chemical analysis; Chemical engineering; DNA; Dictionaries; Gene expression; Genomics; Proteins; Sequences; Vocabulary;
Conference_Titel :
Engineering in Medicine and Biology Society, 2003. Proceedings of the 25th Annual International Conference of the IEEE
Print_ISBN :
0-7803-7789-3
DOI :
10.1109/IEMBS.2003.1280965
