• DocumentCode
    2741501
  • Title

    Critical Review of Data Mining Techniques for Gene Expression Analysis

  • Author

    Aouf, Mazin ; Liyanage, Liwan ; Hansen, Stephen

  • Author_Institution
    Sch. of Comput. & Math., Univ. of Western Sydney, Sydney, NSW
  • fYear
    2008
  • fDate
    12-14 Dec. 2008
  • Firstpage
    367
  • Lastpage
    371
  • Abstract
    Classification of gene expression data has been exploded in the recent years. This can aid in the development of efficient methodology in the field of bio-informatics to be used for tumours diagnosis and treatment. Data mining is an effective technique being used in this field. One of the most difficulties facing this technology is the inappropriate classification methods that examine complex structure of gene expression data. In this paper, we give a brief introduction of gene expression data with experiment and we have made a critical review of major techniques being applied in the field of gene expression data with help of data mining. It can be seen that researchers have developed various techniques for gene data classification. In addition, they may differ from one to another whereas results are still showing the need for enhancement in this field. Some of these techniques are addressed in this paper in term of advantages and disadvantages. Accordingly, the deoxyribonucleic acid (DNA) is considered as the maestro of the tumour-derived factors. Analyzing changes on the gene expression may give rise for diagnosis enhancement of affected tissues in their early stages. For that reason, an ongoing research is addressing the problem of subspace clustering methodologies suitable for high dimensional datasets and verify of the new methodologies using appropriate datasets, particularly suitable for the analysis of gene expression data. In this context, researchers have identified various limitations of these methods particularly in the areas of information integration systems, text-mining and bio-informatics.
  • Keywords
    DNA; biocomputing; bioinformatics; data mining; genetic engineering; patient diagnosis; patient treatment; pattern classification; pattern clustering; tumours; DNA; bio-informatics; data mining techniques; deoxyribonucleic acid; gene expression data classification; information integration systems; knowledge discovery; subspace clustering methodologies; text-mining; tumours diagnosis; tumours treatment; Australia; Clustering algorithms; Clustering methods; DNA; Data mining; Gene expression; Genetics; Mathematics; RNA; Tumors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information and Automation for Sustainability, 2008. ICIAFS 2008. 4th International Conference on
  • Conference_Location
    Colombo
  • Print_ISBN
    978-1-4244-2899-1
  • Electronic_ISBN
    978-1-4244-2900-4
  • Type

    conf

  • DOI
    10.1109/ICIAFS.2008.4783954
  • Filename
    4783954