DocumentCode :
2741501
Title :
Critical Review of Data Mining Techniques for Gene Expression Analysis
Author :
Aouf, Mazin ; Liyanage, Liwan ; Hansen, Stephen
Author_Institution :
Sch. of Comput. & Math., Univ. of Western Sydney, Sydney, NSW
fYear :
2008
fDate :
12-14 Dec. 2008
Firstpage :
367
Lastpage :
371
Abstract :
Classification of gene expression data has been exploded in the recent years. This can aid in the development of efficient methodology in the field of bio-informatics to be used for tumours diagnosis and treatment. Data mining is an effective technique being used in this field. One of the most difficulties facing this technology is the inappropriate classification methods that examine complex structure of gene expression data. In this paper, we give a brief introduction of gene expression data with experiment and we have made a critical review of major techniques being applied in the field of gene expression data with help of data mining. It can be seen that researchers have developed various techniques for gene data classification. In addition, they may differ from one to another whereas results are still showing the need for enhancement in this field. Some of these techniques are addressed in this paper in term of advantages and disadvantages. Accordingly, the deoxyribonucleic acid (DNA) is considered as the maestro of the tumour-derived factors. Analyzing changes on the gene expression may give rise for diagnosis enhancement of affected tissues in their early stages. For that reason, an ongoing research is addressing the problem of subspace clustering methodologies suitable for high dimensional datasets and verify of the new methodologies using appropriate datasets, particularly suitable for the analysis of gene expression data. In this context, researchers have identified various limitations of these methods particularly in the areas of information integration systems, text-mining and bio-informatics.
Keywords :
DNA; biocomputing; bioinformatics; data mining; genetic engineering; patient diagnosis; patient treatment; pattern classification; pattern clustering; tumours; DNA; bio-informatics; data mining techniques; deoxyribonucleic acid; gene expression data classification; information integration systems; knowledge discovery; subspace clustering methodologies; text-mining; tumours diagnosis; tumours treatment; Australia; Clustering algorithms; Clustering methods; DNA; Data mining; Gene expression; Genetics; Mathematics; RNA; Tumors;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Information and Automation for Sustainability, 2008. ICIAFS 2008. 4th International Conference on
Conference_Location :
Colombo
Print_ISBN :
978-1-4244-2899-1
Electronic_ISBN :
978-1-4244-2900-4
Type :
conf
DOI :
10.1109/ICIAFS.2008.4783954
Filename :
4783954
Link To Document :
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