Title :
An enhanced graph-oriented approach for change management in distributed biomedical ontologies and linked data
Author :
Shaban-Nejad, Arash ; Haarslev, Volker
Author_Institution :
Depts. of Epidemiology & Biostat., McGill Univ., Montreal, QC, Canada
Abstract :
This paper reports the summary and results of our research on providing a graph oriented formalism to represent, analyze and validate the evolution of bio-ontologies, with emphasis on the FungalWeb Ontology. In this approach Category theory along with rule-based hierarchical distributed (HD) graph transformation have been employed to propose a more specific semantics for analyzing ontological changes and transformations between different versions of an ontology, as well as tracking the effects of a change in different levels of abstractions.
Keywords :
category theory; graph theory; management of change; medical computing; ontologies (artificial intelligence); FungalWeb ontology; bioontologies; category theory; change management; distributed biomedical ontologies; graph-oriented approach; linked data; rule-based hierarchical distributed graph transformation; Diseases; High definition video; Knowledge based systems; Lattices; Ontologies; Semantics; Taxonomy; bio-ontologies; category theory; fungal genomics; graph transformation; ontology evolution;
Conference_Titel :
Bioinformatics and Biomedicine Workshops (BIBMW), 2011 IEEE International Conference on
Conference_Location :
Atlanta, GA
Print_ISBN :
978-1-4577-1612-6
DOI :
10.1109/BIBMW.2011.6112439