• DocumentCode
    279122
  • Title

    A deductive database system PACADE for the three dimensional structure of protein

  • Author

    Kuhara, Satoru ; Satou, Kenji ; Furuichi, Emiko ; Takagi, Toshihisa ; Takehara, Hideki ; Sakaki, Yoshiyuki

  • Author_Institution
    Graduate Sch. of Genetic Resources Technol., Kyushu Univ., Fukuoka, Japan
  • Volume
    i
  • fYear
    1991
  • fDate
    8-11 Jan 1991
  • Firstpage
    653
  • Abstract
    Describes a deductive database system PACADE (Protein Atomic Coordinate Analyzer with Deductive Engine) which facilitates a search of three dimensional data kept at the Brookhaven´s Protein Data Bank. This system has the following features. Recursive relations can be handled. Long range connectivities between amino acids in proteins can be searched from short range connectivities. The system involves deduction from the approach of bottom up evaluation. Unlike Prolog, it always computes all answers without a description of the control by users and always terminates. This system makes use of query processing techniques proposed for computer science, hence queries are processed efficiently
  • Keywords
    biology computing; deductive databases; macromolecular configurations; proteins; Brookhaven´s Protein Data Bank; PACADE; bottom up evaluation; deductive database; protein; query processing; three dimensional structure; Computer science; Database languages; Database systems; Deductive databases; Engines; Genetics; Proteins; Query processing; Relational databases; Sequences;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    System Sciences, 1991. Proceedings of the Twenty-Fourth Annual Hawaii International Conference on
  • Conference_Location
    Kauai, HI
  • Type

    conf

  • DOI
    10.1109/HICSS.1991.183938
  • Filename
    183938