• DocumentCode
    2803324
  • Title

    Algorithms for sorting and reconstructing heterogeneous nanoscale biological objects from cryo electron microscopy images

  • Author

    Zheng, Yili ; Doerschuk, Peter C.

  • Author_Institution
    Biomed. Eng. & Electr. & Comput. Eng., Cornell Univ., Ithaca, NY, USA
  • fYear
    2009
  • fDate
    June 28 2009-July 1 2009
  • Firstpage
    169
  • Lastpage
    172
  • Abstract
    Statistical algorithms are described for 2- and 3-D signal reconstruction and classification problems based on electron microscopy images where the objects displayed in the images are heterogeneous. Both discrete heterogeneity (there exist classes of objects but all objects within one class are identical) and continuous heterogeneity (there exist classes of objects but, in addition, the objects within a class differ). With continuous heterogeneity, the idea of reconstruction is generalized from reconstruction of a unique 2- or 3-D object to reconstruction of the statistics of the 2- or 3-D object. The basic process is reconstruction by maximum likelihood estimation computed by an expectation-maximization algorithm with classification following as postprocessing given the reconstruction. Two examples are considered, one focusing on classification and one on reconstruction.
  • Keywords
    biothermics; electron microscopy; expectation-maximisation algorithm; image classification; image reconstruction; medical image processing; continuous heterogeneity; cryo electron microscopy; discrete heterogeneity; expectation-maximization algorithm; heterogeneous nanoscale biological objects; maximum likelihood estimation; signal classification; signal reconstruction; statistical algorithms; Biology computing; Biomedical computing; Biomedical engineering; Electron microscopy; Image reconstruction; Nanobioscience; Portals; Scattering; Sorting; Three dimensional displays; 2-D and 3-D image reconstruction; electron microscopy; heterogeneous objects; image classification; tomography; virus;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2009. ISBI '09. IEEE International Symposium on
  • Conference_Location
    Boston, MA
  • ISSN
    1945-7928
  • Print_ISBN
    978-1-4244-3931-7
  • Electronic_ISBN
    1945-7928
  • Type

    conf

  • DOI
    10.1109/ISBI.2009.5193010
  • Filename
    5193010