Title :
Improving classification performance for heterogeneous cancer gene expression data
Author :
Fung, Benny Y M ; Ng, Vincent T Y
Author_Institution :
Dept. of Comput., Hong Kong Polytech. Univ., Kowloon, China
Abstract :
In our previous work, we proposed the "impact factors" (IFs) to measure the symmetric errors in different microarray experiments, and integrated the IFs to the Golub and Slonim (GS) and k-nearest neighbors (kNN) classifiers. In this paper, we perform experiments with different cancer types, which are lung adenocarcinomas and prostate cancer, to further validate the efficiency and effectiveness of the IFs integrations in terms of measurements of classification accuracy, sensitivity and specificity. For both cancer types, the IFs integrations can be successfully improved on the classification performance.
Keywords :
cancer; classification; lung; medical administrative data processing; heterogeneous cancer gene expression data; impact factors; k-nearest neighbors classifiers; lung adenocarcinomas cancer; microarray experiments; prostate cancer; symmetric errors; Data mining; Error correction; Gene expression; Lungs; Performance analysis; Performance evaluation; Probes; Prostate cancer; Sensitivity and specificity; Testing;
Conference_Titel :
Information Technology: Coding and Computing, 2004. Proceedings. ITCC 2004. International Conference on
Print_ISBN :
0-7695-2108-8
DOI :
10.1109/ITCC.2004.1286608