DocumentCode
2881359
Title
A symbolic approach to probabilistic verification of boolean networks
Author
Kobayashi, Koichi ; Hiraishi, Kunihiko
Author_Institution
Sch. of Inf. Sci., Japan Adv. Inst. of Sci. & Technol., Nomi, Japan
fYear
2011
fDate
7-10 Nov. 2011
Firstpage
3764
Lastpage
3769
Abstract
A Boolean network (BN) is well known as one of the models of biological networks such as gene regulatory networks, and has been extensively studied. In this paper, for a BN, the verification problems such as the reachability problem are discussed. First, a probabilistic model including both synchronous and asynchronous Boolean dynamics is derived. This model can be generalized as a probabilistic BN. Next, a solution method of the verification problems is proposed, based on a model checking technique. Finally, our method is applied to an apoptosis network. The proposed approach provides us an easy and convenient tool for analysis and control of biological networks.
Keywords
Boolean functions; biology computing; formal verification; probability; asynchronous Boolean dynamics; biological network; gene regulatory network; model checking technique; probabilistic Boolean network; probabilistic model; probabilistic verification; symbolic approach; Analytical models; Biological system modeling; Boolean functions; Computational modeling; Markov processes; Probabilistic logic;
fLanguage
English
Publisher
ieee
Conference_Titel
IECON 2011 - 37th Annual Conference on IEEE Industrial Electronics Society
Conference_Location
Melbourne, VIC
ISSN
1553-572X
Print_ISBN
978-1-61284-969-0
Type
conf
DOI
10.1109/IECON.2011.6119922
Filename
6119922
Link To Document