• DocumentCode
    2881359
  • Title

    A symbolic approach to probabilistic verification of boolean networks

  • Author

    Kobayashi, Koichi ; Hiraishi, Kunihiko

  • Author_Institution
    Sch. of Inf. Sci., Japan Adv. Inst. of Sci. & Technol., Nomi, Japan
  • fYear
    2011
  • fDate
    7-10 Nov. 2011
  • Firstpage
    3764
  • Lastpage
    3769
  • Abstract
    A Boolean network (BN) is well known as one of the models of biological networks such as gene regulatory networks, and has been extensively studied. In this paper, for a BN, the verification problems such as the reachability problem are discussed. First, a probabilistic model including both synchronous and asynchronous Boolean dynamics is derived. This model can be generalized as a probabilistic BN. Next, a solution method of the verification problems is proposed, based on a model checking technique. Finally, our method is applied to an apoptosis network. The proposed approach provides us an easy and convenient tool for analysis and control of biological networks.
  • Keywords
    Boolean functions; biology computing; formal verification; probability; asynchronous Boolean dynamics; biological network; gene regulatory network; model checking technique; probabilistic Boolean network; probabilistic model; probabilistic verification; symbolic approach; Analytical models; Biological system modeling; Boolean functions; Computational modeling; Markov processes; Probabilistic logic;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    IECON 2011 - 37th Annual Conference on IEEE Industrial Electronics Society
  • Conference_Location
    Melbourne, VIC
  • ISSN
    1553-572X
  • Print_ISBN
    978-1-61284-969-0
  • Type

    conf

  • DOI
    10.1109/IECON.2011.6119922
  • Filename
    6119922