• DocumentCode
    2904972
  • Title

    Characterization of hard limits on performance of autocatalytic pathways

  • Author

    Siami, Milad ; Motee, Nader ; Buzi, Gentian

  • Author_Institution
    Dept. of Mech. Eng. & Mech., Lehigh Univ., Bethlehem, PA, USA
  • fYear
    2013
  • fDate
    17-19 June 2013
  • Firstpage
    2313
  • Lastpage
    2318
  • Abstract
    In this paper, we develop some basic principles to study autocatalytic networks and exploit their structural properties in order to characterize their existing hard limits and essential tradeoffs. In a dynamical system with autocatalytic structure, the system´s output is necessary to catalyze its own production. We consider a simplified model of glycolysis as our motivating example. We study the hard limits of the ideal performance of such pathways. First, for a simple two-state model of glycolysis we explicitly derive the hard limit on the minimum L2-gain disturbance attenuation and the hard limit of its minimum output energy. Then, we generalize our results to higher dimensional model of autocatalytic pathways. Finally, we show that how these resulting hard limits lead to some fundamental tradeoffs between transient and steady-state behavior of the network and its net production.
  • Keywords
    biochemistry; catalysis; molecular biophysics; L2-gain disturbance attenuation; autocatalytic network basic principle; autocatalytic pathway performance; autocatalytic structure; dynamical system; essential tradeoff characterization; explicit hard limit derivation; fundamental tradeoffs; hard limit characterization; higher dimensional model; minimum output energy hard limit; network net production; simplified glycolysis model; steady-state behavior; structural properties; system output; transient-state behavior; two-state glycolysis model; Attenuation; Biochemistry; Feedback control; Production; Robustness; Steady-state; Transient response;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    American Control Conference (ACC), 2013
  • Conference_Location
    Washington, DC
  • ISSN
    0743-1619
  • Print_ISBN
    978-1-4799-0177-7
  • Type

    conf

  • DOI
    10.1109/ACC.2013.6580179
  • Filename
    6580179