DocumentCode
2904972
Title
Characterization of hard limits on performance of autocatalytic pathways
Author
Siami, Milad ; Motee, Nader ; Buzi, Gentian
Author_Institution
Dept. of Mech. Eng. & Mech., Lehigh Univ., Bethlehem, PA, USA
fYear
2013
fDate
17-19 June 2013
Firstpage
2313
Lastpage
2318
Abstract
In this paper, we develop some basic principles to study autocatalytic networks and exploit their structural properties in order to characterize their existing hard limits and essential tradeoffs. In a dynamical system with autocatalytic structure, the system´s output is necessary to catalyze its own production. We consider a simplified model of glycolysis as our motivating example. We study the hard limits of the ideal performance of such pathways. First, for a simple two-state model of glycolysis we explicitly derive the hard limit on the minimum L2-gain disturbance attenuation and the hard limit of its minimum output energy. Then, we generalize our results to higher dimensional model of autocatalytic pathways. Finally, we show that how these resulting hard limits lead to some fundamental tradeoffs between transient and steady-state behavior of the network and its net production.
Keywords
biochemistry; catalysis; molecular biophysics; L2-gain disturbance attenuation; autocatalytic network basic principle; autocatalytic pathway performance; autocatalytic structure; dynamical system; essential tradeoff characterization; explicit hard limit derivation; fundamental tradeoffs; hard limit characterization; higher dimensional model; minimum output energy hard limit; network net production; simplified glycolysis model; steady-state behavior; structural properties; system output; transient-state behavior; two-state glycolysis model; Attenuation; Biochemistry; Feedback control; Production; Robustness; Steady-state; Transient response;
fLanguage
English
Publisher
ieee
Conference_Titel
American Control Conference (ACC), 2013
Conference_Location
Washington, DC
ISSN
0743-1619
Print_ISBN
978-1-4799-0177-7
Type
conf
DOI
10.1109/ACC.2013.6580179
Filename
6580179
Link To Document