DocumentCode :
2911678
Title :
Response time re-scaling and Weber´s law in adapting biological systems
Author :
Hamadeh, Abdullah ; Sontag, Eduardo ; Ingalls, Brian
Author_Institution :
Dept. of Appl. Math., Univ. of Waterloo, Waterloo, ON, Canada
fYear :
2013
fDate :
17-19 June 2013
Firstpage :
4557
Lastpage :
4562
Abstract :
Systems biology has revealed numerous examples of networks whose dynamic behavior is robust to system perturbations and noise. In many cases, this behavior arises from simple yet fundamental features of the system architecture. A well-studied example is the chemotactic response of Escherichia coli. In various models of this system, it is shown that simple assumptions on the receptor methylation dynamics lead to robust perfect adaptation of chemotactic activity. Recent experimental work has also shown that the transient E. coli chemotactic response is unchanged by a scaling of its ligand input signal; this behavior is called fold change detection (FCD), and is in agreement with earlier mathematical predictions. However, this prediction was based on very particular assumptions on the structure of the chemotaxis pathway. In this work, we begin by showing that behavior similar to FCD can be obtained under weaker conditions on the system structure. Namely, we show that under relaxed conditions, a scaling of the chemotaxis system´s inputs leads to a time scaling of the output response. We propose that this may be a contributing factor to the robustness of the experimentally observed FCD. We further show that FCD is a special case of this time scaling behavior for which the time scaling factor of unity. We then proceed to extend the conditions for output time scaling to more general adapting systems, and demonstrate this time scaling behavior on a published model of the chemotaxis pathway of the bacterium Rhodobacter sphaeroides. This work therefore provides examples of how robust biological behavior can arise from simple yet realistic conditions on the underlying system structure.
Keywords :
biology; cell motility; cellular biophysics; microorganisms; perturbation techniques; Escherichia coli; FCD; Weber´s law; adapting biological systems; adapting systems; bacterium Rhodobacter sphaeroides; biological behavior; chemotactic activity; chemotaxis pathway; dynamic behavior; fold change detection; ligand input signal; mathematical predictions; output response; receptor methylation dynamics; response time rescaling; robust perfect adaptation; system architecture; system perturbations; system structure; systems biology; time scaling behavior; time scaling factor; transient E. coli chemotactic response; Adaptation models; Approximation methods; Biological system modeling; Proteins; Robustness; Steady-state; Time factors;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
American Control Conference (ACC), 2013
Conference_Location :
Washington, DC
ISSN :
0743-1619
Print_ISBN :
978-1-4799-0177-7
Type :
conf
DOI :
10.1109/ACC.2013.6580541
Filename :
6580541
Link To Document :
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