• DocumentCode
    2923813
  • Title

    A spectral k-means approach to bright-field cell image segmentation

  • Author

    Bradbury, Laura ; Wan, Justin W L

  • Author_Institution
    Comput. Math., Univ. of Waterloo, Waterloo, ON, Canada
  • fYear
    2010
  • fDate
    Aug. 31 2010-Sept. 4 2010
  • Firstpage
    4748
  • Lastpage
    4751
  • Abstract
    Automatic segmentation of bright-field cell images is important to cell biologists, but difficult to complete due to the complex nature of the cells in bright-field images (poor contrast, broken halo, missing boundaries). Standard approaches such as level set segmentation and active contours work well for fluorescent images where cells appear as round shape, but become less effective when optical artifacts such as halo exist in bright-field images. In this paper, we present a robust segmentation method which combines the spectral and k-means clustering techniques to locate cells in bright-field images. This approach models an image as a matrix graph and segment different regions of the image by computing the appropriate eigenvectors of the matrix graph and using the k-means algorithm. We illustrate the effectiveness of the method by segmentation results of C2C12 (muscle) cells in bright-field images.
  • Keywords
    bio-optics; cellular biophysics; eigenvalues and eigenfunctions; fluorescence; graph theory; image segmentation; medical image processing; muscle; spectral analysis; statistical analysis; C2C12 cells; bright-field cell image segmentation; eigenvectors; fluorescent images; k-means clustering; matrix graph; muscle cells; robust segmentation method; spectral graph partitioning; Active contours; Approximation algorithms; Clustering algorithms; Image edge detection; Image segmentation; Microscopy; Pixel; Algorithms; Animals; Artificial Intelligence; Cell Line; Cell Tracking; Image Enhancement; Image Interpretation, Computer-Assisted; Mice; Muscle Fibers, Skeletal; Pattern Recognition, Automated; Reproducibility of Results; Sensitivity and Specificity; Subtraction Technique;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE
  • Conference_Location
    Buenos Aires
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-4123-5
  • Type

    conf

  • DOI
    10.1109/IEMBS.2010.5626380
  • Filename
    5626380