Title :
Information retrieval techniques for knowledge discovery in biomedical literature
Author :
Cherdioui, Sabrina ; Boubekeur, Fatiha
Author_Institution :
Dept. of Comput. Sci., Mouloud Mammeri Univ. of Tizi Ouzou, Tizi Ouzou, Algeria
Abstract :
This paper presents our contribution to enhance literature-based discovery with information retrieval techniques. We propose the joint use of a flexible Information Retrieval model and MeSH Concepts for knowledge discovery in biomedical literature. The Information Retrieval model contributes to filter MEDLINE biomedical literature to the most relevant documents. Utilizing MeSH concepts allows to quickly identifying candidate concepts that could potentially validate a hypothesis. We have tested our approach by replicating the Swanson´s first discovery on fish oil and Raynaud´s disease correlation. The obtained results show the effectiveness of our approach.
Keywords :
bibliographic systems; bioinformatics; data mining; diseases; document handling; information retrieval; literature; medical computing; MEDLINE biomedical literature; Raynaud disease correlation; Swanson hypothesis; bibliographic database; fish oil correlation; information retrieval techniques; knowledge discovery; literature-based discovery enhancement; mesh concepts; Biological system modeling; Diseases; Filtering; Indexing; Information retrieval; Marine animals; Physiology; Swanson hypothesis; information retrieval; literature-based discovery;
Conference_Titel :
Programming and Systems (ISPS), 2013 11th International Symposium on
Conference_Location :
Algiers
Print_ISBN :
978-1-4799-1152-3
DOI :
10.1109/ISPS.2013.6581479